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PVLDB
2008
116views more  PVLDB 2008»
13 years 8 months ago
Tighter estimation using bottom k sketches
Summaries of massive data sets support approximate query processing over the original data. A basic aggregate over a set of records is the weight of subpopulations specified as a ...
Edith Cohen, Haim Kaplan
TC
2010
13 years 7 months ago
Network-on-Chip Hardware Accelerators for Biological Sequence Alignment
—The most pervasive compute operation carried out in almost all bioinformatics applications is pairwise sequence homology detection (or sequence alignment). Due to exponentially ...
Souradip Sarkar, Gaurav Ramesh Kulkarni, Partha Pr...
KDD
2009
ACM
215views Data Mining» more  KDD 2009»
14 years 9 months ago
Large-scale sparse logistic regression
Logistic Regression is a well-known classification method that has been used widely in many applications of data mining, machine learning, computer vision, and bioinformatics. Spa...
Jun Liu, Jianhui Chen, Jieping Ye
ALMOB
2008
92views more  ALMOB 2008»
13 years 9 months ago
Reconstructing phylogenies from noisy quartets in polynomial time with a high success probability
Background: In recent years, quartet-based phylogeny reconstruction methods have received considerable attentions in the computational biology community. Traditionally, the accura...
Gang Wu, Ming-Yang Kao, Guohui Lin, Jia-Huai You
BMCBI
2010
151views more  BMCBI 2010»
13 years 9 months ago
Misty Mountain clustering: application to fast unsupervised flow cytometry gating
Background: There are many important clustering questions in computational biology for which no satisfactory method exists. Automated clustering algorithms, when applied to large,...
István P. Sugár, Stuart C. Sealfon