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BMCBI
2004
151views more  BMCBI 2004»
13 years 8 months ago
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
Jens Reeder, Robert Giegerich
JAL
2002
113views more  JAL 2002»
13 years 8 months ago
A multivariate view of random bucket digital search trees
We take a multivariate view of digital search trees by studying the number of nodes of different types that may coexist in a bucket digital search tree as it grows under an arbitr...
Friedrich Hubalek, Hsien-Kuei Hwang, William Lew, ...
SIAMDM
1998
89views more  SIAMDM 1998»
13 years 8 months ago
String Noninclusion Optimization Problems
For every string inclusion relation there are two optimization problems: find a longest string included in every string of a given finite language, and find a shortest string in...
Anatoly R. Rubinov, Vadim G. Timkovsky
MST
2007
122views more  MST 2007»
13 years 8 months ago
Rendezvous and Election of Mobile Agents: Impact of Sense of Direction
Consider a collection of r identical asynchronous mobile agents dispersed on an arbitrary anonymous network of size n. The agents all execute the same protocol and move from node ...
Lali Barrière, Paola Flocchini, Pierre Frai...
ECCC
2010
117views more  ECCC 2010»
13 years 7 months ago
Nearly Tight Bounds for Testing Function Isomorphism
We study the problem of testing isomorphism (equivalence up to relabelling of the variables) of two Boolean functions f, g : {0, 1}n → {0, 1}. Our main focus is on the most stud...
Sourav Chakraborty, David García-Soriano, A...