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» Computer algebra in systems biology
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WADT
1998
Springer
15 years 9 months ago
An Algebra of Graph Derivations Using Finite (co-) Limit Double Theories
Graph transformation systems have been introduced for the formal specification of software systems. States are thereby modeled as graphs, and computations as graph derivations acco...
Andrea Corradini, Martin Große-Rhode, Reiko ...
BIRTHDAY
2010
Springer
15 years 3 months ago
Some Thoughts on the Semantics of Biocharts
Abstract. This paper combines three topics to which Amir Pnueli contributed significantly: the semantics of languages for concurrency, the semantics of statecharts, and reactive an...
David Harel, Hillel Kugler
WWW
2001
ACM
16 years 6 months ago
ViBE: virtual biology experiments
The virtual laboratories enhance learning experiences by providing the student with a supplement to the physical lab. The laboratories allow students to perform exercises as in an...
Rajaram Subramanian, Ivan Marsic
180
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BMCBI
2006
118views more  BMCBI 2006»
15 years 6 months ago
Exploration of biological network centralities with CentiBiN
Background: The elucidation of whole-cell regulatory, metabolic, interaction and other biological networks generates the need for a meaningful ranking of network elements. Central...
Björn H. Junker, Dirk Koschützki, Falk S...
CONCUR
2001
Springer
15 years 10 months ago
Probabilistic Information Flow in a Process Algebra
We present a process algebraic approach for extending to the probabilistic setting the classical logical information flow analysis of computer systems. In particular, we employ a ...
Alessandro Aldini