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ACSD
2008
IEEE
130views Hardware» more  ACSD 2008»
16 years 23 days ago
BAM: BioAmbient machine
In recent years it has become clear that techniques developed for concurrent programming are in fact very useful for the analysis of complex systems in biology. To some level of i...
Vinod A. Muganthan, Andrew Phillips, Maria Grazia ...
TGC
2010
Springer
15 years 4 months ago
Uniform Labeled Transition Systems for Nondeterministic, Probabilistic, and Stochastic Processes
Rate transition systems (RTS) are a special kind of transition systems introduced for defining the stochastic behavior of processes and for associating continuous-time Markov chain...
Marco Bernardo, Rocco De Nicola, Michele Loreti
CODES
2008
IEEE
16 years 22 days ago
SPaC: a symbolic pareto calculator
The compositional computation of Pareto points in multi-dimensional optimization problems is an important means to efficiently explore the optimization space. This paper presents ...
Hamid Shojaei, Twan Basten, Marc Geilen, Phillip S...
BMCBI
2010
198views more  BMCBI 2010»
15 years 6 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
ADBIS
2009
Springer
108views Database» more  ADBIS 2009»
16 years 27 days ago
Linear Systems for Regular Hedge Languages
We propose linear systems of hedge language equations (LSH) as a formalism to represent regular hedge languages. These linear systems are suitable for several computations in the a...
Mircea Marin, Temur Kutsia