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» Computing Molecular Potential Energy Surface with DIET
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ICA3PP
2005
Springer
14 years 1 months ago
GridMD: Program Architecture for Distributed Molecular Simulation
In the present work we describe architectural concepts of the distributed molecular simulation package GridMD. The main purpose of this work is to underline the construction patter...
Ilya Valuev
CPHYSICS
2006
103views more  CPHYSICS 2006»
13 years 8 months ago
WATERWAVES: wave particles dynamics on a complex triatomic potential
The WATERWAVES program suite performs complex scattering calculations by propagating a wave packet in a complex, full-dimensional potential for non-rotating (J = 0) but vibrating ...
Simone Taioli, Jonathan Tennyson
JCC
2008
111views more  JCC 2008»
13 years 8 months ago
Highly accurate biomolecular electrostatics in continuum dielectric environments
: Implicit solvent models based on the Poisson-Boltzmann (PB) equation are frequently used to describe the interactions of a biomolecule with its dielectric continuum environment. ...
Y. C. Zhou, Michael Feig, G. W. Wei
EMMCVPR
2005
Springer
14 years 1 months ago
A New Implicit Method for Surface Segmentation by Minimal Paths: Applications in 3D Medical Images
Abstract. We introduce a novel implicit approach for single object segmentation in 3D images. The boundary surface of this object is assumed to contain two known curves (the constr...
Roberto Ardon, Laurent D. Cohen, Anthony J. Yezzi
JCC
2007
63views more  JCC 2007»
13 years 8 months ago
Quantum correction to the pair distribution function
: We report a numerical technique that allows the quantum effects of zero-point motion to be incorporated into Pair Distribution Functions calculated classically for molecules usin...
V. A. Levashov, S. J. L. Billinge, M. F. Thorpe