Sciweavers

59 search results - page 8 / 12
» Computing Molecular Potential Energy Surface with DIET
Sort
View
ERSA
2007
142views Hardware» more  ERSA 2007»
13 years 10 months ago
An FPGA Implementation of Reciprocal Sums for SPME
Molecular Dynamics simulations have become an interesting target for acceleration using Field-Programmable Gate Arrays (FPGA). Still to be attempted completely in FPGA hardware is...
Sam Lee, Paul Chow
CCE
2011
13 years 2 months ago
Computational energy-based redesign of robust proteins
The robustness of a system is a property that pervades all aspects of Nature. The ability of a system to adapt itself to perturbations due to internal and external agents, to agin...
Giovanni Stracquadanio, Giuseppe Nicosia
JCC
2010
95views more  JCC 2010»
13 years 6 months ago
Computational studies on electron and proton transfer in phenol-imidazole-base triads
: The electron and proton transfer in phenol-imidazole-base systems (base 5 NH2 2 or OH2 ) were investigated by density-functional theory calculations. In particular, the role of b...
Shihai Yan, Sunwoo Kang, Tomoyuki Hayashi, Shaul M...
STOC
2003
ACM
136views Algorithms» more  STOC 2003»
14 years 8 months ago
Alpha-shapes and flow shapes are homotopy equivalent
In this paper we establish a topological similarity between two apparently different shape constructors from a set of points. Shape constructors are geometric structures that tran...
Tamal K. Dey, Joachim Giesen, Matthias John
ISMB
1996
13 years 9 months ago
A Knowledge-Based Method for Protein Structure Refinement and Prediction
The native conformation of a protein, in a given environment, is determined entirely by the various interatomic interactions dictated by the amino acid sequence (1-3). We describe...
Shankar Subramaniam, David K. Tcheng, James M. Fen...