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» Computing all Suboptimal Alignments in Linear Space
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KDD
2006
ACM
153views Data Mining» more  KDD 2006»
14 years 7 months ago
Spatial scan statistics: approximations and performance study
Spatial scan statistics are used to determine hotspots in spatial data, and are widely used in epidemiology and biosurveillance. In recent years, there has been much effort invest...
Deepak Agarwal, Andrew McGregor, Jeff M. Phillips,...
SMA
2009
ACM
185views Solid Modeling» more  SMA 2009»
14 years 2 months ago
A dynamic data structure for flexible molecular maintenance and informatics
We present the “Dynamic Packing Grid” (DPG) data structure along with details of our implementation and performance results, for maintaining and manipulating flexible molecul...
Chandrajit L. Bajaj, Rezaul Alam Chowdhury, Muhibu...
GECCO
2005
Springer
186views Optimization» more  GECCO 2005»
14 years 1 months ago
Subproblem optimization by gene correlation with singular value decomposition
Several ways of using singular value decomposition (SVD), a linear algebra technique typically used for information retrieval, to decompose problems into subproblems are investiga...
Jacob G. Martin
SIGECOM
2010
ACM
170views ECommerce» more  SIGECOM 2010»
14 years 8 days ago
Optimal online assignment with forecasts
Motivated by the allocation problem facing publishers in display advertising we formulate the online assignment with forecast problem, a version of the online allocation problem w...
Erik Vee, Sergei Vassilvitskii, Jayavel Shanmugasu...
BMCBI
2008
127views more  BMCBI 2008»
13 years 7 months ago
Human Pol II promoter recognition based on primary sequences and free energy of dinucleotides
Background: Promoter region plays an important role in determining where the transcription of a particular gene should be initiated. Computational prediction of eukaryotic Pol II ...
Jian-Yi Yang, Yu Zhou, Zu-Guo Yu, Vo Anh, Li-Qian ...