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BMCBI
2010
143views more  BMCBI 2010»
13 years 7 months ago
A genome alignment algorithm based on compression
Background: Traditional genome alignment methods consider sequence alignment as a variation of the string edit distance problem, and perform alignment by matching characters of th...
Minh Duc Cao, Trevor I. Dix, Lloyd Allison
BMCBI
2010
154views more  BMCBI 2010»
13 years 7 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...
CONSTRAINTS
2010
153views more  CONSTRAINTS 2010»
13 years 7 months ago
Philosophy of the MiniZinc challenge
MiniZinc arose as a response to the extended discussion at CP2006 of the need for a standard modelling language for CP. This is a challenging problem, and we believe MiniZinc makes...
Peter J. Stuckey, Ralph Becket, Julien Fischer
CORR
2010
Springer
110views Education» more  CORR 2010»
13 years 7 months ago
Provenance and evidence in UniProtKB
Abstract. The primary mission of UniProt is to support biological research by maintaining a stable, comprehensive, fully classified, richly and accurately annotated protein sequenc...
Jerven Bolleman, Alain Gateau, Sebastien Gehant, N...
DEBU
2010
128views more  DEBU 2010»
13 years 7 months ago
Designing Database Operators for Flash-enabled Memory Hierarchies
Flash memory affects not only storage options but also query processing. In this paper, we analyze the use of flash memory for database query processing, including algorithms that...
Goetz Graefe, Stavros Harizopoulos, Harumi A. Kuno...
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