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ICASSP
2007
IEEE
14 years 1 months ago
Protein Fold Recognition using Residue-Based Alignments of Sequence and Secondary Structure
Protein structure prediction aims to determine the three-dimensional structure of proteins form their amino acid sequences. When a protein does not have similarity (homology) to a...
Zafer Aydin, Hakan Erdogan, Yucel Altunbasak
BMCBI
2006
94views more  BMCBI 2006»
13 years 7 months ago
Metabolite coupling in genome-scale metabolic networks
Background: Biochemically detailed stoichiometric matrices have now been reconstructed for various bacteria, yeast, and for the human cardiac mitochondrion based on genomic and pr...
Scott A. Becker, Nathan D. Price, Bernhard O. Pals...
CPAIOR
2007
Springer
14 years 1 months ago
Cost-Bounded Binary Decision Diagrams for 0-1 Programming
Abstract. In recent work binary decision diagrams (BDDs) were introduced as a technique for postoptimality analysis for integer programming. In this paper we show that much smaller...
Tarik Hadzic, John N. Hooker
BMCBI
2010
156views more  BMCBI 2010»
13 years 7 months ago
Protein complex prediction via verifying and reconstructing the topology of domain-domain interactions
Background: High-throughput methods for detecting protein-protein interactions enable us to obtain large interaction networks, and also allow us to computationally identify the as...
Yosuke Ozawa, Rintaro Saito, Shigeo Fujimori, Hisa...
TMI
2010
143views more  TMI 2010»
13 years 2 months ago
Data Specific Spatially Varying Regularization for Multimodal Fluorescence Molecular Tomography
Fluorescence molecular tomography (FMT) allows in vivo localization and quantification of fluorescence biodistributions in whole animals. The ill-posed nature of the tomographic re...
Damon Hyde, Eric L. Miller, Dana H. Brooks, Vasili...