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» Computing with Infinitely Many Processes
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IPPS
2009
IEEE
15 years 9 months ago
DMTCP: Transparent checkpointing for cluster computations and the desktop
DMTCP (Distributed MultiThreaded CheckPointing) is a transparent user-level checkpointing package for distributed applications. Checkpointing and restart is demonstrated for a wid...
Jason Ansel, Kapil Arya, Gene Cooperman
124
Voted
CIKM
2007
Springer
15 years 8 months ago
Effective top-k computation in retrieving structured documents with term-proximity support
Modern web search engines are expected to return top-k results efficiently given a query. Although many dynamic index pruning strategies have been proposed for efficient top-k com...
Mingjie Zhu, Shuming Shi, Mingjing Li, Ji-Rong Wen
128
Voted
DNA
2006
Springer
146views Bioinformatics» more  DNA 2006»
15 years 6 months ago
On Times to Compute Shapes in 2D Tile Self-assembly
We study the times to grow structures within the tile self-assembly model proposed by Winfree, and the possible shapes that can be achieved. Our earlier work was confined to the g...
Yuliy M. Baryshnikov, Edward G. Coffman Jr., Boons...
BMCBI
2010
127views more  BMCBI 2010»
15 years 2 months ago
Computational prediction of type III secreted proteins from gram-negative bacteria
Background: Type III secretion system (T3SS) is a specialized protein delivery system in gramnegative bacteria that injects proteins (called effectors) directly into the eukaryoti...
Yang Yang, Jiayuan Zhao, Robyn L. Morgan, Wenbo Ma...
BMCBI
2011
14 years 9 months ago
PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment
Background: The Monte Carlo simulation of sequence evolution is routinely used to assess the performance of phylogenetic inference methods and sequence alignment algorithms. Progr...
Botond Sipos, Tim Massingham, Gregory E. Jordan, N...