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» Computing with Infinitely Many Processes
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146
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BMCBI
2008
178views more  BMCBI 2008»
15 years 2 months ago
A discriminative method for protein remote homology detection and fold recognition combining Top-n-grams and latent semantic ana
Background: Protein remote homology detection and fold recognition are central problems in bioinformatics. Currently, discriminative methods based on support vector machine (SVM) ...
Bin Liu, Xiaolong Wang, Lei Lin, Qiwen Dong, Xuan ...
134
Voted
CPHYSICS
2006
127views more  CPHYSICS 2006»
15 years 2 months ago
GenAnneal: Genetically modified Simulated Annealing
A modification of the standard Simulated Annealing (SA) algorithm is presented for finding the global minimum of a continuous multidimensional, multimodal function. We report resu...
Ioannis G. Tsoulos, Isaac E. Lagaris
SIGMETRICS
2008
ACM
15 years 2 months ago
Scheduling despite inexact job-size information
Motivated by the optimality of Shortest Remaining Processing Time (SRPT) for mean response time, in recent years many computer systems have used the heuristic of "favoring sm...
Adam Wierman, Misja Nuyens
131
Voted
BMCBI
2005
119views more  BMCBI 2005»
15 years 2 months ago
The distance-profile representation and its application to detection of distantly related protein families
Background: Detecting homology between remotely related protein families is an important problem in computational biology since the biological properties of uncharacterized protei...
Chin-Jen Ku, Golan Yona
128
Voted
BMCBI
2005
116views more  BMCBI 2005»
15 years 2 months ago
Which gene did you mean?
Computational Biology needs computer-readable information records. Increasingly, meta-analysed and pre-digested information is being used in the follow up of high throughput exper...
Barend Mons