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» Computing with Membranes: One More Collapsing Hierarchy
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FOSSACS
2009
Springer
14 years 2 months ago
On Global Model Checking Trees Generated by Higher-Order Recursion Schemes
Higher-order recursion schemes are systems of rewrite rules on typed non-terminal symbols, which can be used to define infinite trees. The Global Modal Mu-Calculus Model Checking...
Christopher Broadbent, C.-H. Luke Ong
ISTCS
1993
Springer
13 years 11 months ago
Analog Computation Via Neural Networks
We pursue a particular approach to analog computation, based on dynamical systems of the type used in neural networks research. Our systems have a xed structure, invariant in time...
Hava T. Siegelmann, Eduardo D. Sontag
CSR
2007
Springer
14 years 1 months ago
Inverting Onto Functions and Polynomial Hierarchy
The class TFNP, defined by Megiddo and Papadimitriou, consists of multivalued functions with values that are polynomially verifiable and guaranteed to exist. Do we have evidence ...
Harry Buhrman, Lance Fortnow, Michal Koucký...
BIOCOMP
2006
13 years 8 months ago
Membrane Remodeling and Diffusion of Cytochrome C from a Geometrically Idealized Mitochondrial Crista
In healthy eukaryotic cells, mitochondria have an outer membrane that surrounds a complex inner membrane structure [7,8]. Cytochrome c is found in the space between the two membra...
John Manor, Peter Salamon, James Nulton, Joseph Ma...
BMCBI
2005
114views more  BMCBI 2005»
13 years 7 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio