— SPICE aims to understand the vital process of translocation of biomolecules across protein pores by computing the free energy profile of the translocating biomolecule along th...
In this paper we show how to extend Coloured Petri Nets (CP-nets), with three new modelling primitives—place capacities, test arcs and inhibitor arcs. The new modelling primitiv...
Many new Java runtime optimizations report relatively small, single-digit performance improvements. On modern virtual and actual hardware, however, the performance impact of an op...
Background: To understand an RNA sequence's mechanism of action, the structure must be known. Furthermore, target RNA structure is an important consideration in the design of...
We report on a case study in which the model checker Uppaal is used to formally model parts of Zeroconf, a protocol for dynamic configuration of IPv4 link-local addresses that has...
Biniam Gebremichael, Frits W. Vaandrager, Miaomiao...