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ML
2008
ACM
15 years 4 months ago
A linear fit gets the correct monotonicity directions
Let f be a function on Rd that is monotonic in every variable. There are 2d possible assignments to the directions of monotonicity (two per variable). We provide sufficient condit...
Malik Magdon-Ismail, Joseph Sill
BMCBI
2008
148views more  BMCBI 2008»
15 years 4 months ago
Discovering biclusters in gene expression data based on high-dimensional linear geometries
Background: In DNA microarray experiments, discovering groups of genes that share similar transcriptional characteristics is instrumental in functional annotation, tissue classifi...
Xiangchao Gan, Alan Wee-Chung Liew, Hong Yan
SIAMSC
2008
129views more  SIAMSC 2008»
15 years 3 months ago
Bottom-Up Construction and 2: 1 Balance Refinement of Linear Octrees in Parallel
Abstract. In this article, we propose new parallel algorithms for the construction and 2:1 balance refinement of large linear octrees on distributed memory machines. Such octrees a...
Hari Sundar, Rahul S. Sampath, George Biros
BMCBI
2010
142views more  BMCBI 2010»
15 years 4 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
JMLR
2006
148views more  JMLR 2006»
15 years 4 months ago
Computational and Theoretical Analysis of Null Space and Orthogonal Linear Discriminant Analysis
Dimensionality reduction is an important pre-processing step in many applications. Linear discriminant analysis (LDA) is a classical statistical approach for supervised dimensiona...
Jieping Ye, Tao Xiong