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BMCBI
2010
131views more  BMCBI 2010»
13 years 2 months ago
Dynamics based alignment of proteins: an alternative approach to quantify dynamic similarity
Background: The dynamic motions of many proteins are central to their function. It therefore follows that the dynamic requirements of a protein are evolutionary constrained. In or...
Márton Münz, Rune B. Lyngsø, Jo...
CEC
2010
IEEE
13 years 8 months ago
Elitist Artificial Bee Colony for constrained real-parameter optimization
Abstract-- A novel algorithm to solve constrained realparameter optimization problems, based on the Artificial Bee Colony algorithm is introduced in this paper. The operators used ...
Efrén Mezura-Montes, Ramiro Ernesto Velez-K...
BMCBI
2006
155views more  BMCBI 2006»
13 years 7 months ago
CAVER: a new tool to explore routes from protein clefts, pockets and cavities
Background: The main aim of this study was to develop and implement an algorithm for the rapid, accurate and automated identification of paths leading from buried protein clefts, ...
Martin Petrek, Michal Otyepka, Pavel Banás,...
SIGMOD
2005
ACM
133views Database» more  SIGMOD 2005»
14 years 7 months ago
Constrained Optimalities in Query Personalization
Personalization is a powerful mechanism that helps users to cope with the abundance of information on the Web. Database query personalization achieves this by dynamically construc...
Georgia Koutrika, Yannis E. Ioannidis
BMCBI
2010
141views more  BMCBI 2010»
13 years 7 months ago
Computing and visually analyzing mutual information in molecular co-evolution
Background: Selective pressure in molecular evolution leads to uneven distributions of amino acids and nucleotides. In fact one observes correlations among such constituents due t...
Sebastian Bremm, Tobias Schreck, Patrick Boba, Ste...