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» Constraint Based Methods for Biological Sequence Analysis
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NAR
2002
105views more  NAR 2002»
15 years 3 months ago
AraC-XylS database: a family of positive transcriptional regulators in bacteria
The AraC-XylS database contains information about a family of positive transcriptional regulators broadly distributed in bacteria. This specific database focuses on protein sequen...
Raquel Tobes, Juan L. Ramos
TCBB
2010
137views more  TCBB 2010»
15 years 2 months ago
Alignments of RNA Structures
— We describe a theoretical unifying framework to express comparison of RNA structures, which we call alignment hierarchy. This framework relies on the definition of common supe...
Guillaume Blin, Alain Denise, Serge Dulucq, Claire...
BMCBI
2010
214views more  BMCBI 2010»
15 years 4 months ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper
TCS
2008
15 years 3 months ago
Algorithms for subsequence combinatorics
A subsequence is obtained from a string by deleting any number of characters; thus in contrast to a substring, a subsequence is not necessarily a contiguous part of the string. Co...
Cees H. Elzinga, Sven Rahmann, Hui Wang
153
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ICCV
2009
IEEE
1556views Computer Vision» more  ICCV 2009»
16 years 9 months ago
Kernel Methods for Weakly Supervised Mean Shift Clustering
Mean shift clustering is a powerful unsupervised data analysis technique which does not require prior knowledge of the number of clusters, and does not constrain the shape of th...
Oncel Tuzel, Fatih Porikli, Peter Meer