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» Constraint Based Methods for Biological Sequence Analysis
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APVIS
2006
15 years 5 months ago
Visual analysis of network centralities
Centrality analysis determines the importance of vertices in a network based on their connectivity within the network structure. It is a widely used technique to analyse network-s...
Tim Dwyer, Seok-Hee Hong, Dirk Koschützki, Fa...
WABI
2005
Springer
124views Bioinformatics» more  WABI 2005»
15 years 9 months ago
Reconstructing Metabolic Networks Using Interval Analysis
Recently, there has been growing interest in the modelling and simulation of biological systems. Such systems are often modelled in terms of coupled ordinary differential equation...
Warwick Tucker, Vincent Moulton
GPB
2010
231views Solid Modeling» more  GPB 2010»
15 years 1 months ago
Mining Gene Expression Profiles: An Integrated Implementation of Kernel Principal Component Analysis and Singular Value Decompos
The detection of genes that show similar profiles under different experimental conditions is often an initial step in inferring the biological significance of such genes. Visualiz...
Ferran Reverter, Esteban Vegas, Pedro Sánch...
RECOMB
2005
Springer
16 years 4 months ago
Likely Scenarios of Intron Evolution
Whether common ancestors of eukaryotes and prokaryotes had introns is one of the oldest unanswered questions in molecular evolution. Recently completed genome sequences have been u...
Miklós Csürös
BCB
2010
125views Bioinformatics» more  BCB 2010»
14 years 11 months ago
Protein structure alignment using elastic shape analysis
In this paper we present a method for flexible protein structure alignment based on elastic shape analysis of backbones, in a manner that can incorporate different characteristics...
Wei Liu, Anuj Srivastava, Jinfeng Zhang