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» Constraint Based Methods for Biological Sequence Analysis
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RECOMB
2003
Springer
16 years 4 months ago
Designing seeds for similarity search in genomic DNA
Large-scale comparison of genomic DNA is of fundamental importance in annotating functional elements of genomes. To perform large comparisons efficiently, BLAST (Methods: Companio...
Jeremy Buhler, Uri Keich, Yanni Sun
BMCBI
2011
14 years 8 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...
CVBIA
2005
Springer
15 years 10 months ago
Segmenting Cardiopulmonary Images Using Manifold Learning with Level Sets
Cardiopulmonary imaging is a key tool in modern diagnostic and interventional medicine. Automated analysis of MRI or ultrasound video is complicated by limitations on the image qua...
Qilong Zhang, Robert Pless
ICML
2005
IEEE
16 years 5 months ago
Multi-class protein fold recognition using adaptive codes
We develop a novel multi-class classification method based on output codes for the problem of classifying a sequence of amino acids into one of many known protein structural class...
Eugene Ie, Jason Weston, William Stafford Noble, C...
MVA
2006
205views Computer Vision» more  MVA 2006»
15 years 4 months ago
Ontological inference for image and video analysis
Abstract This paper presents an approach to designing and implementing extensible computational models for perceiving systems based on a knowledge-driven joint inference approach. ...
Christopher Town