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» Constraint Based Methods for Biological Sequence Analysis
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WCET
2010
15 years 2 months ago
Towards WCET Analysis of Multicore Architectures Using UPPAAL
To take full advantage of the increasingly used shared-memory multicore architectures, software algorithms will need to be parallelized over multiple threads. This means that thre...
Andreas Gustavsson, Andreas Ermedahl, Björn L...
DILS
2008
Springer
15 years 6 months ago
Semi Supervised Spectral Clustering for Regulatory Module Discovery
We propose a novel semi-supervised clustering method for the task of gene regulatory module discovery. The technique uses data on dna binding as prior knowledge to guide the proces...
Alok Mishra, Duncan Gillies
MICCAI
2002
Springer
16 years 5 months ago
Improved Detection Sensitivity in Functional MRI Data Using a Brain Parcelling Technique
We present a comparison between a voxel based approach and a region based technique for detecting brain activation signals in sequences of functional Magnetic Resonance Images (fMR...
Guillaume Flandin, Ferath Kherif, Xavier Pennec, G...
TNN
2010
205views Management» more  TNN 2010»
14 years 11 months ago
Behavior-constrained support vector machines for fMRI data analysis
Statistical learning methods are emerging as a valuable tool for decoding information from neural imaging data. The noisy signal and the limited number of training patterns that ar...
Danmei Chen, Sheng Li, Zoe Kourtzi, Si Wu
ALMOB
2008
81views more  ALMOB 2008»
15 years 4 months ago
Stability of multiple alignments and phylogenetic trees: an analysis of ABC-transporter proteins family
Background: Sequence-based phylogeny reconstruction is a fundamental task in Bioinformatics. Practically all methods for phylogeny reconstruction are based on multiple alignments....
Holger Wagner, Burkhard Morgenstern, Andreas W. M....