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» Constraint Based Methods for Biological Sequence Analysis
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BMCBI
2010
97views more  BMCBI 2010»
15 years 4 months ago
SeqRate: sequence-based protein folding type classification and rates prediction
Background: Protein folding rate is an important property of a protein. Predicting protein folding rate is useful for understanding protein folding process and guiding protein des...
Guan Ning Lin, Zheng Wang, Dong Xu, Jianlin Cheng
BMCBI
2010
138views more  BMCBI 2010»
15 years 4 months ago
A database and API for variation, dense genotyping and resequencing data
Background: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale rese...
Daniel Rios, William M. McLaren, Yuan Chen, Ewan B...
NAR
2008
122views more  NAR 2008»
15 years 4 months ago
SIMAP - structuring the network of protein similarities
Protein sequences are the most important source of evolutionary and functional information for new proteins. In order to facilitate the computationally intensive tasks of sequence...
Thomas Rattei, Patrick Tischler, Roland Arnold, Fr...
TKDE
1998
111views more  TKDE 1998»
15 years 3 months ago
Efficient Data Mining for Path Traversal Patterns
—In this paper, we explore a new data mining capability that involves mining path traversal patterns in a distributed information-providing environment where documents or objects...
Ming-Syan Chen, Jong Soo Park, Philip S. Yu
FCT
2001
Springer
15 years 8 months ago
Best Increments for the Average Case of Shellsort
This paper presents the results of using sequential analysis to find increment sequences that minimize the average running time of Shellsort, for array sizes up to several thousan...
Marcin Ciura