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» Constraint Based Methods for Biological Sequence Analysis
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TCBB
2008
122views more  TCBB 2008»
15 years 4 months ago
Mixed Integer Linear Programming for Maximum-Parsimony Phylogeny Inference
Reconstruction of phylogenetic trees is a fundamental problem in computational biology. While excellent heuristic methods are available for many variants of this problem, new adva...
Srinath Sridhar, Fumei Lam, Guy E. Blelloch, R. Ra...
ALMOB
2007
155views more  ALMOB 2007»
15 years 4 months ago
Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid rep
Background: Some amino acid residues functionally interact with each other. This interaction will result in an evolutionary co-variation between these residues – coevolution. Ou...
Rodrigo Gouveia-Oliveira, Anders Gorm Pedersen
ICBA
2004
Springer
172views Biometrics» more  ICBA 2004»
15 years 9 months ago
Hallucinating Face by Eigentransformation with Distortion Reduction
Abstract. In this paper, we propose a face hallucination method using eigentransformation with distortion reduction. Different from most of the proposed methods based on probabilis...
Xiaogang Wang, Xiaoou Tang
ACSAC
2001
IEEE
15 years 7 months ago
Temporal Signatures for Intrusion Detection
We introduce a new method for detecting intrusions based on the temporal behavior of applications. It builds on an existing method of application intrusion detection developed at ...
Anita Jones, Song Li
BMCBI
2006
202views more  BMCBI 2006»
15 years 4 months ago
Spectral embedding finds meaningful (relevant) structure in image and microarray data
Background: Accurate methods for extraction of meaningful patterns in high dimensional data have become increasingly important with the recent generation of data types containing ...
Brandon W. Higgs, Jennifer W. Weller, Jeffrey L. S...