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» Constraint Based Methods for Biological Sequence Analysis
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WABI
2010
Springer
128views Bioinformatics» more  WABI 2010»
13 years 6 months ago
Sparsification of RNA Structure Prediction Including Pseudoknots
Background: Although many RNA molecules contain pseudoknots, computational prediction of pseudoknotted RNA structure is still in its infancy due to high running time and space con...
Mathias Möhl, Raheleh Salari, Sebastian Will,...
CCS
2010
ACM
13 years 8 months ago
Dialog-based payload aggregation for intrusion detection
Network-based Intrusion Detection Systems (IDSs) such as Snort or Bro that have to analyze the packet payload for all the received data show severe performance problems if used in...
Tobias Limmer, Falko Dressler
JACM
2006
99views more  JACM 2006»
13 years 8 months ago
Finding a maximum likelihood tree is hard
Abstract. Maximum likelihood (ML) is an increasingly popular optimality criterion for selecting evolutionary trees [Felsenstein 1981]. Finding optimal ML trees appears to be a very...
Benny Chor, Tamir Tuller
JCB
2007
144views more  JCB 2007»
13 years 8 months ago
Statistical Estimation of Statistical Mechanical Models: Helix-Coil Theory and Peptide Helicity Prediction
Analysis of biopolymer sequences and structures generally adopts one of two approaches: use of detailed biophysical theoretical models of the system with experimentally-determined...
Scott C. Schmidler, Joseph E. Lucas, Terrence G. O...
ECCV
2006
Springer
14 years 10 months ago
Self-calibration of a General Radially Symmetric Distortion Model
Abstract. We present a new approach for self-calibrating the distortion function and the distortion center of cameras with general radially symmetric distortion. In contrast to mos...
Jean-Philippe Tardif, Peter F. Sturm, Sébas...