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» Constraint Based Methods for Biological Sequence Analysis
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137
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ICFCA
2004
Springer
15 years 9 months ago
BLID: An Application of Logical Information Systems to Bioinformatics
BLID (Bio-Logical Intelligent Database) is a bioinformatic system designed to help biologists extract new knowledge from raw genome data by providing high-level facilities for both...
Sébastien Ferré, Ross D. King
114
Voted
ICC
2009
IEEE
173views Communications» more  ICC 2009»
15 years 10 months ago
Low-Complexity List-Based Frame Synchronization for LDPC Coded Transmission
Abstract—In this paper, we propose a simple and efficient twostage list synchronizer for frame synchronization of Low-Density Parity-Check (LDPC) coded data transmitted over the...
Cedomir Stefanovic, Dejan Vukobratovic, Dragana Ba...
142
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BMCBI
2006
127views more  BMCBI 2006»
15 years 3 months ago
Construction of phylogenetic trees by kernel-based comparative analysis of metabolic networks
Background: To infer the tree of life requires knowledge of the common characteristics of each species descended from a common ancestor as the measuring criteria and a method to c...
Sok June Oh, Je-Gun Joung, Jeong Ho Chang, Byoung-...
RECOMB
2001
Springer
16 years 3 months ago
Analysis techniques for microarray time-series data
We address possible limitations of publicly available data sets of yeast gene expression. We study the predictability of known regulators via time-series analysis, and show that l...
Vladimir Filkov, Steven Skiena, Jizu Zhi
RECOMB
2000
Springer
15 years 7 months ago
Sequencing-by-hybridization at the information-theory bound: an optimal algorithm
In a recent paper (Preparata et al., 1999) we introduced a novel probing scheme for DNA sequencing by hybridization (SBH). The new gapped-probe scheme combines natural and univers...
Franco P. Preparata, Eli Upfal