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» Constraint Based Methods for Biological Sequence Analysis
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144
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ISBI
2009
IEEE
15 years 10 months ago
Quantitative Comparison of Spot Detection Methods in Live-Cell Fluorescence Microscopy Imaging
In live-cell fluorescence microscopy imaging, quantitative analysis of biological image data generally involves the detection of many subresolution objects, appearing as diffract...
Ihor Smal, Marco Loog, Wiro J. Niessen, Erik H. W....
141
Voted
BMCBI
2010
144views more  BMCBI 2010»
15 years 3 months ago
Finding sRNA generative locales from high-throughput sequencing data with NiBLS
Background: Next-generation sequencing technologies allow researchers to obtain millions of sequence reads in a single experiment. One important use of the technology is the seque...
Daniel MacLean, Vincent Moulton, David J. Studholm...
125
Voted
BMCBI
2010
138views more  BMCBI 2010»
15 years 3 months ago
Amino acid classification based spectrum kernel fusion for protein subnuclear localization
Background: Prediction of protein localization in subnuclear organelles is more challenging than general protein subcelluar localization. There are only three computational models...
Suyu Mei, Wang Fei
140
Voted
IEEEPACT
1998
IEEE
15 years 8 months ago
A Matrix-Based Approach to the Global Locality Optimization Problem
Global locality analysis is a technique for improving the cache performance of a sequence of loop nests through a combination of loop and data layout optimizations. Pure loop tran...
Mahmut T. Kandemir, Alok N. Choudhary, J. Ramanuja...
CSB
2003
IEEE
113views Bioinformatics» more  CSB 2003»
15 years 9 months ago
An Optimal DNA Segmentation Based on the MDL Principle
: The biological world is highly stochastic and inhomogeneous in its behaviour. There are regions in DNA with high concentration of G or C bases; stretches of sequences with an abu...
Wojciech Szpankowski, Wenhui Ren, Lukasz Szpankows...