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CPM
1993
Springer
154views Combinatorics» more  CPM 1993»
13 years 11 months ago
On Suboptimal Alignments of Biological Sequences
It is widely accepted that the optimal alignment between a pair of proteins or nucleic acid sequences that minimizes the edit distance may not necessarily re ect the correct biolog...
Dalit Naor, Douglas L. Brutlag
AAAI
2008
13 years 9 months ago
Perpetual Learning for Non-Cooperative Multiple Agents
This paper examines, by argument, the dynamics of sequences of behavioural choices made, when non-cooperative restricted-memory agents learn in partially observable stochastic gam...
Luke Dickens
ACL
1996
13 years 8 months ago
Combining Trigram-based and Feature-based Methods for Context-Sensitive Spelling Correction
This paper addresses the problem of correcting spelling errors that result in valid, though unintended words (such as peace and piece, or quiet and quite) and also the problem of ...
Andrew R. Golding, Yves Schabes
BIBE
2010
IEEE
144views Bioinformatics» more  BIBE 2010»
13 years 8 months ago
Knowledge-Guided Docking of Flexible Ligands to SH2 Domain Proteins
Studies of interactions between protein domains and ligands are important in many aspects such as cellular signaling and regulation. In this work, we applied a three-stage knowledg...
Haiyun Lu, Shamima Banu Bte Sm Rashid, Hao Li, Wee...
BMCBI
2006
111views more  BMCBI 2006»
13 years 7 months ago
PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
Tomer Hertz, Chen Yanover