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» Contention-Sensitive Data Structures and Algorithms
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WABI
2005
Springer
120views Bioinformatics» more  WABI 2005»
14 years 3 months ago
Multiple Structural RNA Alignment with Lagrangian Relaxation
In contrast to proteins, many classes of functionally related RNA molecules show a rather weak sequence conservation but instead a fairly well conserved secondary structure. Hence ...
Markus Bauer, Gunnar W. Klau, Knut Reinert
HT
2003
ACM
14 years 2 months ago
The connectivity sonar: detecting site functionality by structural patterns
Web sites today serve many different functions, such as corporate sites, search engines, e-stores, and so forth. As sites are created for different purposes, their structure and...
Einat Amitay, David Carmel, Adam Darlow, Ronny Lem...
ALGORITHMICA
2010
127views more  ALGORITHMICA 2010»
13 years 9 months ago
An Algorithm for Minimum Cost Arc-Connectivity Orientations
Given a 2k-edge-connected undirected graph, we consider to find a minimum cost orientation that yields a k-arc-connected directed graph. This minimum cost k-arc-connected orientat...
Satoru Iwata, Yusuke Kobayashi
PG
2002
IEEE
14 years 2 months ago
A Divide and Conquer Algorithm for Triangle Mesh Connectivity Encoding
We propose a divide and conquer algorithm for the single resolution encoding of triangle mesh connectivity. Starting from a boundary edge we grow a zig-zag strip which divides the...
Ioannis P. Ivrissimtzis, Christian Rössl, Han...
TALG
2008
127views more  TALG 2008»
13 years 9 months ago
Fully dynamic algorithms for chordal graphs and split graphs
We present the rst dynamic algorithm that maintains a clique tree representation of a chordal graph and supports the following operations: (1) query whether deleting or inserting ...
Louis Ibarra