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BMCBI
2010
161views more  BMCBI 2010»
15 years 2 months ago
FRASS: the web-server for RNA structural comparison
Background: The impressive increase of novel RNA structures, during the past few years, demands automated methods for structure comparison. While many algorithms handle only small...
Svetlana Kirillova, Silvio C. E. Tosatto, Oliviero...
120
Voted
BMCBI
2006
130views more  BMCBI 2006»
15 years 2 months ago
4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing
Background: In sequence analysis the multiple alignment builds the fundament of all proceeding analyses. Errors in an alignment could strongly influence all succeeding analyses an...
Philipp N. Seibel, Tobias Müller, Thomas Dand...
100
Voted
RECOMB
1998
Springer
15 years 6 months ago
The hierarchical organization of molecular structure computations
The task of computing molecular structure from combinations of experimental and theoretical constraints is expensive because of the large number of estimated parameters (the 3D co...
Cheng Che Chen, Jaswinder Pal Singh, Russ B. Altma...
BMCBI
2008
109views more  BMCBI 2008»
15 years 2 months ago
ConStruct: Improved construction of RNA consensus structures
Background: Aligning homologous non-coding RNAs (ncRNAs) correctly in terms of sequence and structure is an unresolved problem, due to both mathematical complexity and imperfect s...
Andreas Wilm, Kornelia Linnenbrink, Gerhard Steger
136
Voted
OPODIS
2007
15 years 4 months ago
Peer to Peer Multidimensional Overlays: Approximating Complex Structures
Peer to peer overlay networks have proven to be a good support for storing and retrieving data in a fully decentralized way. A sound approach is to structure them in such a way tha...
Olivier Beaumont, Anne-Marie Kermarrec, Etienne Ri...