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BMCBI
2010
121views more  BMCBI 2010»
13 years 2 months ago
G-stack modulated probe intensities on expression arrays - sequence corrections and signal calibration
Background: The brightness of the probe spots on expression microarrays intends to measure the abundance of specific mRNA targets. Probes with runs of at least three guanines (G) ...
Mario Fasold, Peter F. Stadler, Hans Binder
BMCBI
2008
118views more  BMCBI 2008»
13 years 7 months ago
Kismeth: Analyzer of plant methylation states through bisulfite sequencing
Background: There is great interest in probing the temporal and spatial patterns of cytosine methylation states in genomes of a variety of organisms. It is hoped that this will sh...
Eyal Gruntman, Yijun Qi, R. Keith Slotkin, Ted Roe...
WABI
2010
Springer
167views Bioinformatics» more  WABI 2010»
13 years 6 months ago
Quantifying the Strength of Natural Selection of a Motif Sequence
Quantification of selective pressures on regulatory sequences is a central question in studying the evolution of gene regulatory networks. Previous methods focus primarily on sing...
Chen-Hsiang Yeang
ICST
2010
IEEE
13 years 6 months ago
Repairing GUI Test Suites Using a Genetic Algorithm
—Recent advances in automated functional testing of Graphical User Interfaces (GUIs) rely on deriving graph models that approximate all possible sequences of events that may be e...
Si Huang, Myra B. Cohen, Atif M. Memon
DSMML
2004
Springer
14 years 1 months ago
Multi Channel Sequence Processing
Abstract. This paper summarizes some of the current research challenges arising from multi-channel sequence processing. Indeed, multiple real life applications involve simultaneous...
Samy Bengio, Hervé Bourlard