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BMCBI
2010
150views more  BMCBI 2010»
13 years 8 months ago
MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure
Background: The reconstruction of protein complexes from the physical interactome of organisms serves as a building block towards understanding the higher level organization of th...
Sriganesh Srihari, Kang Ning, Hon Wai Leong
CORR
2010
Springer
143views Education» more  CORR 2010»
13 years 8 months ago
Connectivity in Sub-Poisson Networks
: We consider a class of point processes, which we call sub-Poisson; these are point processes that can be directionallyconvexly (dcx) dominated by some Poisson point process. The ...
Bartlomiej Blaszczyszyn, D. Yogeshwaran
BMCBI
2005
94views more  BMCBI 2005»
13 years 8 months ago
Measuring similarities between transcription factor binding sites
Background: Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify regulatory elements in DNA sequences. Subsets of highly similar profi...
Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
IDA
1998
Springer
13 years 8 months ago
Self-Organized-Expert Modular Network for Classification of Spatiotemporal Sequences
We investigate a form of modular neural network for classification with (a) pre-separated input vectors entering its specialist (expert) networks, (b) specialist networks which ar...
Sylvian R. Ray, William H. Hsu
CCS
2011
ACM
12 years 8 months ago
BitShred: feature hashing malware for scalable triage and semantic analysis
The sheer volume of new malware found each day is growing at an exponential pace. This growth has created a need for automatic malware triage techniques that determine what malwar...
Jiyong Jang, David Brumley, Shobha Venkataraman