This paper presents a package, called Heterogeneous PBLAS (HeteroPBLAS), which is built on top of PBLAS and provides optimized parallel basic linear algebra subprograms for hetero...
Ravi Reddy Manumachu, Alexey L. Lastovetsky, Pedro...
The characteristics of irregular algorithms make a parallel implementation difficult, especially for PC clusters or clusters of SMPs. These characteristics may include an unpredi...
Abstract--Microarray-based comparative genomic hybridization (aCGH) offers an increasingly fine-grained method for detecting copy number variations in DNA. These copy number variat...
Jeffrey A. Delmerico, Nathanial A. Byrnes, Andrew ...
This paper describes the design and the implementation of parallel routines in the Heterogeneous ScaLAPACK library that solve a dense system of linear equations. This library is w...
Ravi Reddy Manumachu, Alexey L. Lastovetsky, Pedro...
Reconstructing a physical map of a chromosome from a genomic library presents a central computational problem in genetics. Physical map reconstruction in the presence of errors is...
Suchendra M. Bhandarkar, Salem Machaka, Sanjay She...