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BMCBI
2005
134views more  BMCBI 2005»
15 years 2 months ago
Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST)
Background: BLAST is one of the most common and useful tools for Genetic Research. This paper describes a software application we have termed Windows .NET Distributed Basic Local ...
Scot E. Dowd, Joaquin Zaragoza, Javier R. Rodrigue...
BMCBI
2008
87views more  BMCBI 2008»
15 years 2 months ago
Protein structure search and local structure characterization
Background: Structural similarities among proteins can provide valuable insight into their functional mechanisms and relationships. As the number of available three-dimensional (3...
Shih-Yen Ku, Yuh-Jyh Hu
ISMB
2000
15 years 3 months ago
Search for a New Description of Protein Topology and Local Structure
A novel description of protein structure in terms of the generalized secondary structure elements (GSSE) is proposed. GSSE's are defined as fragments of the protein structure...
Lukasz Jaroszewski, Adam Godzik
123
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UAI
2003
15 years 3 months ago
Exploiting Locality in Searching the Web
Published experiments on spidering the Web suggest that, given training data in the form of a (relatively small) subgraph of the Web containing a subset of a selected class of tar...
Joel Young, Thomas Dean
ATVA
2004
Springer
77views Hardware» more  ATVA 2004»
15 years 7 months ago
Localizing Errors in Counterexample with Iteratively Witness Searching
We propose a novel approach to locate errors in complex counterexample of safety property. Our approach measures the distance between two state transition traces with difference o...
ShengYu Shen, Ying Qin, Sikun Li