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PVM
2005
Springer
14 years 1 months ago
Implementing Byte-Range Locks Using MPI One-Sided Communication
We present an algorithm for implementing byte-range locks using MPI passive-target one-sided communication. This algorithm is useful in any scenario in which multiple processes of ...
Rajeev Thakur, Robert B. Ross, Robert Latham
SAC
2009
ACM
14 years 2 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
HPCA
2002
IEEE
14 years 8 months ago
CableS: Thread Control and Memory Management Extensions for Shared Virtual Memory Clusters
Clusters of high-end workstations and PCs are currently used in many application domains to perform large-scale computations or as scalable servers for I/O bound tasks. Although c...
Peter Jamieson, Angelos Bilas
IPPS
2007
IEEE
14 years 2 months ago
Peak-Performance DFA-based String Matching on the Cell Processor
The security of your data and of your network is in the hands of intrusion detection systems, virus scanners and spam filters, which are all critically based on string matching. ...
Daniele Paolo Scarpazza, Oreste Villa, Fabrizio Pe...
IPPS
2007
IEEE
14 years 2 months ago
Improving MPI Independent Write Performance Using A Two-Stage Write-Behind Buffering Method
Many large-scale production applications often have very long executions times and require periodic data checkpoints in order to save the state of the computation for program rest...
Wei-keng Liao, Avery Ching, Kenin Coloma, Alok N. ...