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» DBAli tools: mining the protein structure space
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BMCBI
2006
100views more  BMCBI 2006»
13 years 7 months ago
STAR: predicting recombination sites from amino acid sequence
Background: Designing novel proteins with site-directed recombination has enormous prospects. By locating effective recombination sites for swapping sequence parts, the probabilit...
Denis C. Bauer, Mikael Bodén, Ricarda Thier...
KDD
2002
ACM
104views Data Mining» more  KDD 2002»
14 years 7 months ago
Generalization Methods in Bioinformatics
Protein secondary structure prediction and high-throughput drug screen data mining are two important applications in bioinformatics. The data is represented in sparse feature spac...
Steven Eschrich, Nitesh V. Chawla, Lawrence O. Hal...
SISAP
2009
IEEE
155views Data Mining» more  SISAP 2009»
14 years 2 months ago
Analyzing Metric Space Indexes: What For?
—It has been a long way since the beginnings of metric space searching, where people coming from algorithmics tried to apply their background to this new paradigm, obtaining vari...
Gonzalo Navarro
BMCBI
2010
132views more  BMCBI 2010»
13 years 7 months ago
Protein docking by Rotation-Based Uniform Sampling (RotBUS) with fast computing of intermolecular contact distance and residue d
Background: Protein-protein interactions are fundamental for the majority of cellular processes and their study is of enormous biotechnological and therapeutic interest. In recent...
Albert Solernou, Juan Fernández-Recio
BMCBI
2008
208views more  BMCBI 2008»
13 years 7 months ago
GraphFind: enhancing graph searching by low support data mining techniques
Background: Biomedical and chemical databases are large and rapidly growing in size. Graphs naturally model such kinds of data. To fully exploit the wealth of information in these...
Alfredo Ferro, Rosalba Giugno, Misael Mongiov&igra...