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BICOB
2010
Springer
14 years 24 days ago
Algebraic Theory of DNA Recombination
In this paper we investigate the structure and representation of n-ary algebras arising from DNA recombination, where n is a number of DNA segments participating in recombination. ...
Sergei R. Sverchkov
BMCBI
2006
139views more  BMCBI 2006»
13 years 8 months ago
DNA Molecule Classification Using Feature Primitives
Background: We present a novel strategy for classification of DNA molecules using measurements from an alpha-Hemolysin channel detector. The proposed approach provides excellent c...
Raja Tanveer Iqbal, Matthew Landry, Stephen Winter...
CISIS
2010
IEEE
14 years 1 months ago
A Parallel Programming Framework for Multi-core DNA Sequence Alignment
—A new parallel programming framework for DNA sequence alignment in homogeneous multi-core processor architectures is proposed. Contrasting with traditional coarse-grained parall...
Tiago Jose Barreiros Martins de Almeida, Nuno Fili...
HICSS
1995
IEEE
105views Biometrics» more  HICSS 1995»
13 years 11 months ago
A parallel algorithm for calculating the potential energy in DNA
The Dreiding force field is a seven-term equation that describes the potential energy in a molecule as a function of the relative positions of bonded atoms and electrostatic inte...
John S. Conery, Warner L. Peticolas, Thomas Rush I...
BIRD
2008
Springer
177views Bioinformatics» more  BIRD 2008»
13 years 10 months ago
Fast Structured Motif Search in DNA Sequences
We study the problem of structured motif search in DNA sequences. This is a fundamental task in bioinformatics which contributes to better understanding of genome characteristics a...
Mihail Halachev, Nematollaah Shiri