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ICASSP
2010
IEEE
13 years 10 months ago
Acceleration of sequence kernel computation for real-time speaker identification
The sequence kernel has been shown to be a promising kernel function for learning from sequential data such as speech and DNA. However, it is not scalable to massive datasets due ...
Makoto Yamada, Masashi Sugiyama, Gordon Wichern, T...
IDA
2003
Springer
14 years 3 months ago
Similarity-Based Neural Networks for Applications in Computational Molecular Biology
This paper presents an alternative to distance-based neural networks. A distance measure is the underlying property on which many neural models rely, for example self-organizing ma...
Igor Fischer
ARC
2007
Springer
123views Hardware» more  ARC 2007»
14 years 2 months ago
Multiple Sequence Alignment Using Reconfigurable Computing
The alignment of multiple protein (or DNA) sequences is a current problem in Bioinformatics. ClustalW is the most popular heuristic algorithm for multiple sequence alignment. Pairw...
Carlos R. Erig Lima, Heitor S. Lopes, Maiko R. Mor...
PDPTA
2007
13 years 11 months ago
Software Support for Non-Numerical Computing on Multi-Core Chips
- Multi-core chips present a new computing environment that can benefit from software support for non-numerical applications. Heterogeneous cores will allow efficient sophisticated...
Jerry Potter, Howard Jay Siegel
ICPR
2006
IEEE
14 years 11 months ago
A Hybrid, Recursive Algorithm for Clustering Expressed Sequence Tags in Chlamydomonas reinhardtii
We present an efficient, fully automated algorithm to assemble ESTs into full-length cDNA sequences that represent the complete coding regions of a gene. Our EST clustering algori...
Arthur Grossman, Charles Hauser, Hilary J. Holz, J...