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IMSCCS
2006
IEEE
14 years 4 months ago
Estimation Of Cross-Hybridization Signals Using Support Vector Regression
Microarray technology is a powerful biotechnology tool which allows researchers to simultaneously evaluate the expression of thousands of genes, if not the entire expressed genome...
Yijun Sun, Li Liu, Mick Popp, William G. Farmerie
BMCBI
2010
116views more  BMCBI 2010»
13 years 10 months ago
Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences
Background: Precise and efficient methods for gene targeting are critical for detailed functional analysis of genomes and regulatory networks and for potentially improving the eff...
Jeffry D. Sander, Deepak Reyon, Morgan L. Maeder, ...
BMCBI
2005
73views more  BMCBI 2005»
13 years 10 months ago
Empirical codon substitution matrix
Background: Codon substitution probabilities are used in many types of molecular evolution studies such as determining Ka/Ks ratios, creating ancestral DNA sequences or aligning c...
Adrian Schneider, Gina Cannarozzi, Gaston H. Gonne...
SC
2005
ACM
14 years 3 months ago
Scheduling speculative tasks in a compute farm
Users often behave speculatively, submitting work that initially they do not know is needed. Farm computing often consists of single node speculative tasks issued by, e.g., bioinf...
David Petrou, Garth A. Gibson, Gregory R. Ganger
DNA
2005
Springer
134views Bioinformatics» more  DNA 2005»
14 years 3 months ago
Complexity of Compact Proofreading for Self-assembled Patterns
Abstract. Fault-tolerance is a critical issue for biochemical computation. Recent theoretical work on algorithmic self-assembly has shown that error correcting tile sets are possib...
David Soloveichik, Erik Winfree