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» DNA Models and Algorithms for NP-Complete Problems
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CIBCB
2005
IEEE
14 years 1 months ago
Feedback Memetic Algorithms for Modeling Gene Regulatory Networks
— In this paper we address the problem of finding gene regulatory networks from experimental DNA microarray data. We focus on the evaluation of the performance of memetic algori...
Christian Spieth, Felix Streichert, Jochen Supper,...
BIOID
2008
149views Biometrics» more  BIOID 2008»
13 years 9 months ago
Additive Block Coding Schemes for Biometric Authentication with the DNA Data
Abstract. To implement a biometric authentication scheme, the templates of a group of people are stored in the database (DB) under the names of these people. Some person presents a...
Vladimir B. Balakirsky, Anahit R. Ghazaryan, A. J....
BMCBI
2005
201views more  BMCBI 2005»
13 years 7 months ago
Principal component analysis for predicting transcription-factor binding motifs from array-derived data
Background: The responses to interleukin 1 (IL-1) in human chondrocytes constitute a complex regulatory mechanism, where multiple transcription factors interact combinatorially to...
Yunlong Liu, Matthew P. Vincenti, Hiroki Yokota
GCB
2000
Springer
75views Biometrics» more  GCB 2000»
13 years 11 months ago
Regexpcount, a Symbolic Package for Counting Problems on Regular Expressions and Words
In previous work [10], we considered algorithms related to the statistics of matches with words and regular expressions in texts generated by Bernoulli or Markov sources. In this w...
Pierre Nicodème
BMCBI
2010
153views more  BMCBI 2010»
13 years 7 months ago
Metamotifs - a generative model for building families of nucleotide position weight matrices
Background: Development of high-throughput methods for measuring DNA interactions of transcription factors together with computational advances in short motif inference algorithms...
Matias Piipari, Thomas A. Down, Tim J. P. Hubbard