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» Data Classification on Multiple Manifolds
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BMCBI
2006
166views more  BMCBI 2006»
13 years 7 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
BMCBI
2011
13 years 2 months ago
Logical Development of the Cell Ontology
Background: The Cell Ontology (CL) is an ontology for the representation of in vivo cell types. As biological ontologies such as the CL grow in complexity, they become increasingl...
Terrence F. Meehan, Anna Maria Masci, Amina Abdull...
KDD
2009
ACM
191views Data Mining» more  KDD 2009»
14 years 7 months ago
Efficient methods for topic model inference on streaming document collections
Topic models provide a powerful tool for analyzing large text collections by representing high dimensional data in a low dimensional subspace. Fitting a topic model given a set of...
Limin Yao, David M. Mimno, Andrew McCallum
ESANN
2006
13 years 8 months ago
Random Forests Feature Selection with K-PLS: Detecting Ischemia from Magnetocardiograms
Random Forests were introduced by Breiman for feature (variable) selection and improved predictions for decision tree models. The resulting model is often superior to AdaBoost and ...
Long Han, Mark J. Embrechts, Boleslaw K. Szymanski...
BMCBI
2008
100views more  BMCBI 2008»
13 years 7 months ago
PatternLab for proteomics: a tool for differential shotgun proteomics
Background: A goal of proteomics is to distinguish between states of a biological system by identifying protein expression differences. Liu et al. demonstrated a method to perform...
Paulo C. Carvalho, Juliana S. G. Fischer, Emily I....