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» Data Integration Using DataPile Structure
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BMCBI
2006
180views more  BMCBI 2006»
13 years 7 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
ARTMED
2006
158views more  ARTMED 2006»
13 years 7 months ago
CareVis: Integrated visualization of computerized protocols and temporal patient data
Objective: Currently, visualization support for patient data analysis is mostly limited to the representation of directly measured data. Contextual information on performed treatm...
Wolfgang Aigner, Silvia Miksch
RECOMB
2010
Springer
14 years 2 months ago
Incremental Signaling Pathway Modeling by Data Integration
Constructing quantitative dynamic models of signaling pathways is an important task for computational systems biology. Pathway model construction is often an inherently incremental...
Geoffrey Koh, David Hsu, P. S. Thiagarajan
BMCBI
2010
118views more  BMCBI 2010»
13 years 7 months ago
From learning taxonomies to phylogenetic learning: Integration of 16S rRNA gene data into FAME-based bacterial classification
Background: Machine learning techniques have shown to improve bacterial species classification based on fatty acid methyl ester (FAME) data. Nonetheless, FAME analysis has a limit...
Bram Slabbinck, Willem Waegeman, Peter Dawyndt, Pa...
KBSE
2007
IEEE
14 years 1 months ago
Assertion-based repair of complex data structures
Programmers have long used assertions to characterize properties of code. An assertion violation signals a corruption in the program state. At such a state, it is standard to term...
Bassem Elkarablieh, Ivan Garcia, Yuk Lai Suen, Sar...