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ISMB
1997
13 years 9 months ago
SEALS: A System for Easy Analysis of Lots of Sequences
We present a system of programs designed to facilitate sequence analysis projects involving large amounts of data. SEALS (System for Easy Analysis of Lots of Sequences) is a logic...
D. Roland Walker, Eugene V. Koonin
ICASSP
2009
IEEE
14 years 2 months ago
DNA coding using finite-context models and arithmetic coding
The interest in DNA coding has been growing with the availability of extensive genomic databases. Although only two bits are sufficient to encode the four DNA bases, efficient l...
Armando J. Pinho, António J. R. Neves, Carl...
NAR
2007
149views more  NAR 2007»
13 years 7 months ago
UniHI: an entry gate to the human protein interactome
Systematic mapping of protein–protein interactions has become a central task of functional genomics. To map the human interactome, several strategies have recently been pursued....
Gautam Chaurasia, Yasir Iqbal, Christian Häni...
BMCBI
2006
89views more  BMCBI 2006»
13 years 7 months ago
ORENZA: a web resource for studying ORphan ENZyme activities
Background: Despite the current availability of several hundreds of thousands of amino acid sequences, more than 36% of the enzyme activities (EC numbers) defined by the Nomenclat...
Olivier Lespinet, Bernard Labedan
SIGMOD
2010
ACM
232views Database» more  SIGMOD 2010»
13 years 8 months ago
Optimizing content freshness of relations extracted from the web using keyword search
An increasing number of applications operate on data obtained from the Web. These applications typically maintain local copies of the web data to avoid network latency in data acc...
Mohan Yang, Haixun Wang, Lipyeow Lim, Min Wang