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BMCBI
2008
125views more  BMCBI 2008»
13 years 7 months ago
SynteBase/SynteView: a tool to visualize gene order conservation in prokaryotic genomes
Background: It has been repeatedly observed that gene order is rapidly lost in prokaryotic genomes. However, persistent synteny blocks are found when comparing more or less distan...
Frédéric Lemoine, Bernard Labedan, O...
BIBE
2004
IEEE
179views Bioinformatics» more  BIBE 2004»
13 years 11 months ago
Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study
This research explores the feasibility of semantic similarity approaches to supporting predictive tasks in functional genomics. It aims to establish potential relationships betwee...
Francisco Azuaje, Olivier Bodenreider
BMCBI
2006
85views more  BMCBI 2006»
13 years 7 months ago
Quality control for terms and definitions in ontologies and taxonomies
Background: Ontologies and taxonomies are among the most important computational resources for molecular biology and bioinformatics. A series of recent papers has shown that the G...
Jacob Köhler, Katherine Munn, Alexander R&uum...
DASFAA
2005
IEEE
137views Database» more  DASFAA 2005»
14 years 1 months ago
A General Approach to Mining Quality Pattern-Based Clusters from Microarray Data
Abstract. Pattern-based clustering has broad applications in microarray data analysis, customer segmentation, e-business data analysis, etc. However, pattern-based clustering often...
Daxin Jiang, Jian Pei, Aidong Zhang
LSGRID
2004
Springer
14 years 1 months ago
Development of a Grid Infrastructure for Functional Genomics
The BRIDGES project is incrementally developing and exploring database integration over six geographically distributed research sites with the framework of a Wellcome Trust biomedi...
Richard O. Sinnott, Micha Bayer, Derek Houghton, D...