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BMCBI
2008
142views more  BMCBI 2008»
13 years 7 months ago
Optimal neighborhood indexing for protein similarity search
Background: Similarity inference, one of the main bioinformatics tasks, has to face an exponential growth of the biological data. A classical approach used to cope with this data ...
Pierre Peterlongo, Laurent Noé, Dominique L...
NAR
2008
174views more  NAR 2008»
13 years 5 months ago
miRGator: an integrated system for functional annotation of microRNAs
MicroRNAs (miRNAs) constitute an important class of regulators that are involved in various cellular and disease processes. However, the functional significance of each miRNA is m...
Seungyoon Nam, Bumjin Kim, Seokmin Shin, Sanghyuk ...
WS
2010
ACM
13 years 5 months ago
Semantic web enabled software analysis
One of the most important decisions researchers face when analyzing software systems is the choice of a proper data analysis/exchange format. In this paper, we present EvoOnt, a s...
Jonas Tappolet, Christoph Kiefer, Abraham Bernstei...
SADM
2010
196views more  SADM 2010»
13 years 2 months ago
Bayesian adaptive nearest neighbor
: The k nearest neighbor classification (k-NN) is a very simple and popular method for classification. However, it suffers from a major drawback, it assumes constant local class po...
Ruixin Guo, Sounak Chakraborty
ICS
2009
Tsinghua U.
14 years 2 months ago
High-performance regular expression scanning on the Cell/B.E. processor
Matching regular expressions (regexps) is a very common workload. For example, tokenization, which consists of recognizing words or keywords in a character stream, appears in ever...
Daniele Paolo Scarpazza, Gregory F. Russell