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» Data parallelism in bioinformatics workflows using Hydra
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IPPS
2006
IEEE
14 years 1 months ago
An experimental study of optimizing bioinformatics applications
As bioinformatics is an emerging application of high performance computing, this paper first evaluates the memory performance of several representative bioinformatics application...
Guangming Tan, Lin Xu, Shengzhong Feng, Ninghui Su...
GCC
2006
Springer
13 years 11 months ago
UGE4B: An Universal Grid Environment for Bioinformatics Research
Recent years, grid technology has been used widely in the fields of scientific research. In this paper, we present an universal grid environment for Bioinformatics Research (UGE4B...
Gang Chen, Yongwei Wu, Weimin Zheng
BIOCOMP
2006
13 years 8 months ago
Performance of Sequence Alignment Bioinformatics Applications on General Purpose Processors: A Case Study
- Aligning specific sequences against other known sequences in a database is a central aspect of bioinformatics. New experimental data being added continuously to these databases n...
Pradeep Nair, Eugene John
CAISE
2009
Springer
13 years 11 months ago
Data-Flow Anti-patterns: Discovering Data-Flow Errors in Workflows
Despite the abundance of analysis techniques to discover control-flow errors in workflow designs, there is hardly any support for w verification. Most techniques simply abstract fr...
Nikola Trcka, Wil M. P. van der Aalst, Natalia Sid...
BMCBI
2005
196views more  BMCBI 2005»
13 years 7 months ago
Chemistry in Bioinformatics
Chemical information is now seen as critical for most areas of life sciences. But unlike Bioinformatics, where data is Openly available and freely re-usable, most chemical informa...
Peter Murray-Rust, John B. O. Mitchell, Henry S. R...