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» Data parallelism in bioinformatics workflows using Hydra
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DNA
2004
Springer
14 years 27 days ago
Parallelism in Gene Assembly
The process of gene assembly in ciliates, an ancient group of organisms, is one of the most complex instances of DNA manipulation known in any organisms. This process is fascinatin...
Tero Harju, Chang Li, Ion Petre, Grzegorz Rozenber...
ICS
2007
Tsinghua U.
14 years 1 months ago
GridRod: a dynamic runtime scheduler for grid workflows
Grid Workflows are emerging as practical programming models for solving large e-scientific problems on the Grid. However, it is typically assumed that the workflow components eith...
Shahaan Ayyub, David Abramson
BIBM
2009
IEEE
218views Bioinformatics» more  BIBM 2009»
14 years 2 months ago
Real-Time Non-rigid Registration of Medical Images on a Cooperative Parallel Architecture
Abstract—Unacceptable execution time of Non-rigid registration (NRR) often presents a major obstacle to its routine clinical use. Parallel computing is an effective way to accele...
Yixun Liu, Andriy Fedorov, Ron Kikinis, Nikos Chri...
HPDC
2002
IEEE
14 years 13 days ago
Decoupling Computation and Data Scheduling in Distributed Data-Intensive Applications
In high energy physics, bioinformatics, and other disciplines, we encounter applications involving numerous, loosely coupled jobs that both access and generate large data sets. So...
Kavitha Ranganathan, Ian T. Foster
GRID
2000
Springer
13 years 11 months ago
Data Management in an International Data Grid Project
Abstract. In this paper we report on preliminary work and architectural design carried out in the "Data Management" work package in the International Data Grid project. O...
Wolfgang Hoschek, Francisco Javier Jaén-Mar...