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» Data parallelism in bioinformatics workflows using Hydra
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BMCBI
2011
13 years 2 months ago
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
Zsuzsanna Sukosd, Bjarne Knudsen, Morten Vaerum, J...
ESCIENCE
2007
IEEE
14 years 1 months ago
Building a Data Grid for the Australian Nanostructural Analysis Network
: This paper describes the architecture and services developed by the GRANI project for the Australian Nanostructural Analysis Network Organization (NANO). The aim of GRANI was to ...
Brendan Mauger, Jane Hunter, John Drennan, Ashley ...
HIPC
2003
Springer
14 years 21 days ago
Parallel and Distributed Frequent Itemset Mining on Dynamic Datasets
Traditional methods for data mining typically make the assumption that data is centralized and static. This assumption is no longer tenable. Such methods waste computational and I/...
Adriano Veloso, Matthew Eric Otey, Srinivasan Part...
SBACPAD
2003
IEEE
180views Hardware» more  SBACPAD 2003»
14 years 23 days ago
New Parallel Algorithms for Frequent Itemset Mining in Very Large Databases
Frequent itemset mining is a classic problem in data mining. It is a non-supervised process which concerns in finding frequent patterns (or itemsets) hidden in large volumes of d...
Adriano Veloso, Wagner Meira Jr., Srinivasan Parth...
BMCBI
2008
169views more  BMCBI 2008»
13 years 7 months ago
MausDB: An open source application for phenotype data and mouse colony management in large-scale mouse phenotyping projects
Background: Large-scale, comprehensive and standardized high-throughput mouse phenotyping has been established as a tool of functional genome research by the German Mouse Clinic a...
Holger Maier, Christoph Lengger, Bruno Simic, Helm...