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» Data parallelism in bioinformatics workflows using Hydra
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IPPS
2006
IEEE
14 years 1 months ago
Workflow fine-grained concurrency with automatic continuation
Workflow enactment systems are becoming an effective solution to ease programming, deployment and execution of distributed applications in several domains such as telecommunicatio...
Giancarlo Tretola, Eugenio Zimeo
BMCBI
2004
131views more  BMCBI 2004»
13 years 7 months ago
A web services choreography scenario for interoperating bioinformatics applications
Background: Very often genome-wide data analysis requires the interoperation of multiple databases and analytic tools. A large number of genome databases and bioinformatics applic...
Remko de Knikker, Youjun Guo, Jin-long Li, Albert ...
HPDC
2010
IEEE
13 years 8 months ago
Versioning for workflow evolution
Scientists working in eScience environments often use workflows to carry out their computations. Since the workflows evolve as the research itself evolves, these workflows can be ...
Eran Chinthaka Withana, Beth Plale, Roger S. Barga...
IPPS
2008
IEEE
14 years 1 months ago
Supporting high performance bioinformatics flat-file data processing using indices
As an essential part of in vitro analysis, biological database query has become more and more important in the research process. A few challenges that are specific to bioinformat...
Xuan Zhang, Gagan Agrawal
ESCIENCE
2007
IEEE
14 years 1 months ago
Connecting Scientific Data to Scientific Experiments with Provenance
As scientific workflows and the data they operate on, grow in size and complexity, the task of defining how those workflows should execute (which resources to use, where the resou...
Simon Miles, Ewa Deelman, Paul T. Groth, Karan Vah...