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» Database Searching with DNA and Protein Sequences: An Introd...
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PRICAI
2004
Springer
14 years 27 days ago
Prediction of the Risk Types of Human Papillomaviruses by Support Vector Machines
Abstract. Infection by high-risk human papillomaviruses (HPVs) is associated with the development of cervical cancers. Classification of risk types is important to understand the ...
Je-Gun Joung, Sok June Oh, Byoung-Tak Zhang
BMCBI
2008
120views more  BMCBI 2008»
13 years 7 months ago
DBMLoc: a Database of proteins with multiple subcellular localizations
Background: Subcellular localization information is one of the key features to protein function research. Locating to a specific subcellular compartment is essential for a protein...
Song Zhang, Xuefeng Xia, Jincheng Shen, Yun Zhou, ...
BMCBI
2006
120views more  BMCBI 2006»
13 years 7 months ago
Projections for fast protein structure retrieval
Background: In recent times, there has been an exponential rise in the number of protein structures in databases e.g. PDB. So, design of fast algorithms capable of querying such d...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
IPPS
2003
IEEE
14 years 25 days ago
A Fast Algorithm for the Exhaustive Analysis of 12-Nucleotide-Long DNA Sequences. Applications to Human Genomics
We have developed a new algorithm that allows the exhaustive determination of words of up to 12 nucleotides in DNA sequences. It is fast enough as to be used at a genomic scale ru...
Vicente Arnau, Ignacio Marín
ECCB
2005
IEEE
14 years 1 months ago
SIMAP - The similarity matrix of proteins
Similarity Matrix of Proteins (SIMAP) (http://mips.gsf. 10 de/simap) provides a database based on a precomputed similarity matrix covering the similarity space formed by .4 millio...
Roland Arnold, Thomas Rattei, Patrick Tischler, Mi...