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ECCC
2010
140views more  ECCC 2010»
13 years 4 months ago
Query-Efficient Locally Decodable Codes
A k-query locally decodable code (LDC) C : n N encodes each message x into a codeword C(x) such that each symbol of x can be probabilistically recovered by querying only k coordina...
Yeow Meng Chee, Tao Feng, San Ling, Huaxiong Wang,...
ICASSP
2007
IEEE
14 years 4 months ago
Toward Turbo Decoding of RNA Secondary Structure
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
CIBCB
2006
IEEE
14 years 4 months ago
Machine Learning in Basecalling Decoding Trace Peak Behaviour
— DNA sequence basecalling is commonly regarded as a solved problem, despite significant error rates being reflected in inaccuracies in databases and genome annotations. These er...
David Thornley, Stavros Petridis
GECCO
2007
Springer
162views Optimization» more  GECCO 2007»
14 years 4 months ago
Some novel locality results for the blob code spanning tree representation
The Blob Code is a bijective tree code that represents each tree on n labelled vertices as a string of n − 2 vertex labels. In recent years, several researchers have deployed th...
Tim Paulden, David K. Smith
ICIP
2003
IEEE
14 years 11 months ago
Towards a theory for video coding using distributed compression principles
Thispaper presents an information-theoreticstudy ofvideo codecs that are based on the principle of source coding with side information at the decoder In contrast to the classical ...
Prakash Ishwar, Vinod M. Prabhakaran, Kannan Ramch...