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BIBE
2007
IEEE
128views Bioinformatics» more  BIBE 2007»
14 years 2 months ago
QOMA2: Optimizing the alignment of many sequences
Abstract—We consider the problem of aligning multiple protein sequences with the goal of maximizing the SP (Sum-of-Pairs) score, when the number of sequences is large. The QOMA (...
Xu Zhang, Tamer Kahveci
SIGIR
2008
ACM
13 years 7 months ago
Multi-document summarization via sentence-level semantic analysis and symmetric matrix factorization
Multi-document summarization aims to create a compressed summary while retaining the main characteristics of the original set of documents. Many approaches use statistics and mach...
Dingding Wang, Tao Li, Shenghuo Zhu, Chris H. Q. D...
BMCBI
2010
143views more  BMCBI 2010»
13 years 7 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
MLDM
2007
Springer
14 years 1 months ago
Nonlinear Feature Selection by Relevance Feature Vector Machine
Support vector machine (SVM) has received much attention in feature selection recently because of its ability to incorporate kernels to discover nonlinear dependencies between feat...
Haibin Cheng, Haifeng Chen, Guofei Jiang, Kenji Yo...
ACCV
2006
Springer
14 years 1 months ago
Stereo Matching Using Iterated Graph Cuts and Mean Shift Filtering
In this paper, we propose a new stereo matching algorithm using an iterated graph cuts and mean shift filtering technique. Our algorithm consists of following two steps. In the ...
Ju Yong Chang, Kyoung Mu Lee, Sang Uk Lee