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JBI
2004
171views Bioinformatics» more  JBI 2004»
13 years 10 months ago
Consensus Clustering and Functional Interpretation of Gene Expression Data
Microarray analysis using clustering algorithms can suffer from lack of inter-method consistency in assigning related gene-expression profiles to clusters. Obtaining a consensus s...
Paul Kellam, Stephen Swift, Allan Tucker, Veronica...
SDM
2008
SIAM
120views Data Mining» more  SDM 2008»
13 years 10 months ago
Spatial Scan Statistics for Graph Clustering
In this paper, we present a measure associated with detection and inference of statistically anomalous clusters of a graph based on the likelihood test of observed and expected ed...
Bei Wang, Jeff M. Phillips, Robert Schreiber, Denn...
FOCS
2009
IEEE
14 years 3 months ago
Distance Oracles for Sparse Graphs
Abstract— Thorup and Zwick, in their seminal work, introduced the approximate distance oracle, which is a data structure that answers distance queries in a graph. For any integer...
Christian Sommer 0002, Elad Verbin, Wei Yu
IPPS
2005
IEEE
14 years 2 months ago
Reducing Power with Performance Constraints for Parallel Sparse Applications
Sparse and irregular computations constitute a large fraction of applications in the data-intensive scientific domain. While every effort is made to balance the computational wor...
Guangyu Chen, Konrad Malkowski, Mahmut T. Kandemir...
GCB
2003
Springer
105views Biometrics» more  GCB 2003»
14 years 1 months ago
In silico prediction of UTR repeats using clustered EST data
Clustering of EST data is a method for the non-redundant representation of an organisms transcriptome. During clustering of large amounts of EST data, usually some large clusters ...
Stefan A. Rensing, Daniel Lang, Ralf Reski